Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 AC009113.1-201ENST00000570267 2443 ntBASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM56Q9BRZ2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM56Q9BRZ2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 TSPY20P-201ENST00000450910 630 ntBASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM56Q9BRZ2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM56Q9BRZ2 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM56Q9BRZ2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms