Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.29■□□□□ 0.84
RAD9AQ99638 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAD9AQ99638 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.29■□□□□ 0.84
RAD9AQ99638 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD9AQ99638 AL662844.1-201ENST00000546340 181 ntBASIC20.29■□□□□ 0.84
RAD9AQ99638 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
RAD9AQ99638 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.29■□□□□ 0.84
RAD9AQ99638 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.29■□□□□ 0.84
RAD9AQ99638 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
RAD9AQ99638 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD9AQ99638 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.29■□□□□ 0.84
RAD9AQ99638 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.29■□□□□ 0.84
RAD9AQ99638 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RAD9AQ99638 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RAD9AQ99638 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.28■□□□□ 0.84
RAD9AQ99638 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.28■□□□□ 0.84
RAD9AQ99638 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.28■□□□□ 0.84
RAD9AQ99638 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.28■□□□□ 0.84
RAD9AQ99638 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
RAD9AQ99638 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.28■□□□□ 0.84
RAD9AQ99638 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.28■□□□□ 0.84
RAD9AQ99638 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.28■□□□□ 0.84
RAD9AQ99638 AP002469.2-201ENST00000531724 424 ntBASIC20.28■□□□□ 0.84
RAD9AQ99638 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.28■□□□□ 0.84
RAD9AQ99638 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
RAD9AQ99638 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.28■□□□□ 0.84
RAD9AQ99638 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RAD9AQ99638 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RAD9AQ99638 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RAD9AQ99638 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.27■□□□□ 0.84
RAD9AQ99638 SLC25A6P4-201ENST00000586535 553 ntBASIC20.27■□□□□ 0.84
RAD9AQ99638 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.27■□□□□ 0.84
RAD9AQ99638 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.27■□□□□ 0.84
RAD9AQ99638 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RAD9AQ99638 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAD9AQ99638 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.27■□□□□ 0.83
RAD9AQ99638 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
RAD9AQ99638 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RAD9AQ99638 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD9AQ99638 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD9AQ99638 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.26■□□□□ 0.83
RAD9AQ99638 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RAD9AQ99638 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.26■□□□□ 0.83
RAD9AQ99638 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.26■□□□□ 0.83
RAD9AQ99638 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.26■□□□□ 0.83
RAD9AQ99638 AC104819.1-201ENST00000504587 486 ntBASIC20.26■□□□□ 0.83
RAD9AQ99638 AC079776.4-201ENST00000511039 504 ntBASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms