Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
PRPF18Q99633 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PRPF18Q99633 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PRPF18Q99633 GUSBP6-202ENST00000438529 1198 ntBASIC18.43■□□□□ 0.54
PRPF18Q99633 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.43■□□□□ 0.54
PRPF18Q99633 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.43■□□□□ 0.54
PRPF18Q99633 MYC-209ENST00000641252 345 ntBASIC18.43■□□□□ 0.54
PRPF18Q99633 AC124283.5-201ENST00000624661 1809 ntBASIC18.43■□□□□ 0.54
PRPF18Q99633 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PRPF18Q99633 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PRPF18Q99633 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.43■□□□□ 0.54
PRPF18Q99633 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.43■□□□□ 0.54
PRPF18Q99633 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.43■□□□□ 0.54
PRPF18Q99633 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PRPF18Q99633 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
PRPF18Q99633 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PRPF18Q99633 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
PRPF18Q99633 AC141586.3-201ENST00000562166 1838 ntBASIC18.42■□□□□ 0.54
PRPF18Q99633 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 KRT8P8-201ENST00000434750 1448 ntBASIC18.42■□□□□ 0.54
PRPF18Q99633 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.42■□□□□ 0.54
PRPF18Q99633 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.42■□□□□ 0.54
PRPF18Q99633 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.42■□□□□ 0.54
PRPF18Q99633 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.42■□□□□ 0.54
PRPF18Q99633 PNMA6B-201ENST00000538162 1200 ntBASIC18.42■□□□□ 0.54
PRPF18Q99633 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
PRPF18Q99633 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.42■□□□□ 0.54
PRPF18Q99633 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.42■□□□□ 0.54
PRPF18Q99633 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.42■□□□□ 0.54
PRPF18Q99633 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.42■□□□□ 0.54
PRPF18Q99633 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PRPF18Q99633 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.42■□□□□ 0.54
PRPF18Q99633 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PRPF18Q99633 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 NOC2LP1-202ENST00000452600 2235 ntBASIC18.41■□□□□ 0.54
PRPF18Q99633 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.41■□□□□ 0.54
PRPF18Q99633 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 AL138781.1-201ENST00000566567 1274 ntBASIC18.41■□□□□ 0.54
PRPF18Q99633 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.41■□□□□ 0.54
PRPF18Q99633 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
PRPF18Q99633 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PRPF18Q99633 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.4■□□□□ 0.54
PRPF18Q99633 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.4■□□□□ 0.54
PRPF18Q99633 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
PRPF18Q99633 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PRPF18Q99633 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.4■□□□□ 0.54
PRPF18Q99633 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.4■□□□□ 0.54
PRPF18Q99633 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.4■□□□□ 0.54
PRPF18Q99633 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.4■□□□□ 0.54
PRPF18Q99633 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.4■□□□□ 0.54
PRPF18Q99633 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms