Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
BBS4Q96RK4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 FEM1AP3-201ENST00000403722 1741 ntBASIC18.01■□□□□ 0.47
BBS4Q96RK4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AC004408.2-201ENST00000623613 2777 ntBASIC18.01■□□□□ 0.47
BBS4Q96RK4 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 AL359736.2-201ENST00000621992 437 ntBASIC18.01■□□□□ 0.47
BBS4Q96RK4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
BBS4Q96RK4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
BBS4Q96RK4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18■□□□□ 0.47
BBS4Q96RK4 KSR1P1-201ENST00000446298 240 ntBASIC18■□□□□ 0.47
BBS4Q96RK4 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18■□□□□ 0.47
BBS4Q96RK4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 AL353708.3-201ENST00000610272 989 ntBASIC18■□□□□ 0.47
BBS4Q96RK4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC18■□□□□ 0.47
BBS4Q96RK4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18■□□□□ 0.47
BBS4Q96RK4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
BBS4Q96RK4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
BBS4Q96RK4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.99■□□□□ 0.47
BBS4Q96RK4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
BBS4Q96RK4 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 KRT8P41-201ENST00000533985 1514 ntBASIC17.98■□□□□ 0.47
BBS4Q96RK4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.98■□□□□ 0.47
BBS4Q96RK4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BBS4Q96RK4 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms