Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 AL162412.1-201ENST00000567129 965 ntBASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 AC100791.3-201ENST00000617619 330 ntBASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CLPTM1LQ96KA5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 BRI3-207ENST00000539286 699 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CLPTM1LQ96KA5 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AC080080.1-201ENST00000625121 2420 ntBASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.22■□□□□ 0.51
CLPTM1LQ96KA5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 AL162741.1-201ENST00000565563 1558 ntBASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
CLPTM1LQ96KA5 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms