Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 KRT18P38-201ENST00000449496 1282 ntBASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 AC008622.2-201ENST00000617006 1229 ntBASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SHKBP1Q8TBC3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AC116562.4-201ENST00000641316 2276 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 ZNF815P-204ENST00000434898 1737 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AC009947.2-201ENST00000444014 672 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 FAM86EP-206ENST00000510506 987 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 MIR4674-201ENST00000582457 87 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AL121956.5-201ENST00000625261 221 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AP000550.4-202ENST00000639755 178 ntBASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SHKBP1Q8TBC3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AL671277.2-201ENST00000458060 996 ntBASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SHKBP1Q8TBC3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
SHKBP1Q8TBC3 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms