Protein–RNA interactions for Protein: Q8NHY2

RFWD2, E3 ubiquitin-protein ligase RFWD2, humanhuman

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2Q8NHY2 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RFWD2Q8NHY2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 AC068338.2-201ENST00000563278 1430 ntBASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RFWD2Q8NHY2 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 DUX4L16-201ENST00000555130 1264 ntBASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 AL137784.2-201ENST00000607332 1000 ntBASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.77■□□□□ 0.6
RFWD2Q8NHY2 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
RFWD2Q8NHY2 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.77■□□□□ 0.59
RFWD2Q8NHY2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.77■□□□□ 0.59
RFWD2Q8NHY2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 AC092437.1-201ENST00000624794 1048 ntBASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 FEM1AP3-201ENST00000403722 1741 ntBASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 AC126763.1-201ENST00000552015 2118 ntBASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
RFWD2Q8NHY2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 AC008764.6-201ENST00000595909 2069 ntBASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RFWD2Q8NHY2 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms