Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNAAF1Q8NEP3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 AL512353.2-201ENST00000448759 1962 ntBASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 TSPY6P-201ENST00000448518 926 ntBASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 HLA-B-256ENST00000639848 1089 ntBASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 Z98044.1-201ENST00000632503 1764 ntBASIC16.71■□□□□ 0.27
DNAAF1Q8NEP3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.71■□□□□ 0.26
DNAAF1Q8NEP3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
DNAAF1Q8NEP3 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
DNAAF1Q8NEP3 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.71■□□□□ 0.26
DNAAF1Q8NEP3 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 GUSBP6-202ENST00000438529 1198 ntBASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 AC097658.1-201ENST00000475555 843 ntBASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
DNAAF1Q8NEP3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
DNAAF1Q8NEP3 AC093525.10-201ENST00000625130 1569 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms