Protein–RNA interactions for Protein: Q8IYG6

LRRC56, Leucine-rich repeat-containing protein 56, humanhuman

Predicted RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56Q8IYG6 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRC56Q8IYG6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LRRC56Q8IYG6 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.33■□□□□ 0.52
LRRC56Q8IYG6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRRC56Q8IYG6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 KRT8P9-201ENST00000558927 1449 ntBASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRRC56Q8IYG6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 TNXA-203ENST00000507684 2038 ntBASIC18.3■□□□□ 0.52
LRRC56Q8IYG6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms