Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LRRTM1Q86UE6 AP000997.3-201ENST00000623333 2250 ntBASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 AC004911.1-201ENST00000416316 871 ntBASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LRRTM1Q86UE6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 RAP2CP1-201ENST00000605103 478 ntBASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 AL121906.2-201ENST00000621597 723 ntBASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LRRTM1Q86UE6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 AC126763.1-201ENST00000552015 2118 ntBASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LRRTM1Q86UE6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms