Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CDHR3Q6ZTQ4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 KRASP1-201ENST00000407852 552 ntBASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 AC133681.1-201ENST00000465482 601 ntBASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 AL121829.2-201ENST00000620908 328 ntBASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.08■□□□□ 0.64
CDHR3Q6ZTQ4 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 AL354751.1-201ENST00000412768 1863 ntBASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDHR3Q6ZTQ4 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 AC008550.1-201ENST00000511500 884 ntBASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 PRKY-204ENST00000533551 1019 ntBASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 KRT8P8-201ENST00000434750 1448 ntBASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.06■□□□□ 0.64
CDHR3Q6ZTQ4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDHR3Q6ZTQ4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms