Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S3Q6QNY0 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
BLOC1S3Q6QNY0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.14■□□□□ 0.49
BLOC1S3Q6QNY0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 AC126763.1-201ENST00000552015 2118 ntBASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
BLOC1S3Q6QNY0 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 AC060766.5-201ENST00000590539 871 ntBASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 IKBKGP1-201ENST00000612193 1073 ntBASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
BLOC1S3Q6QNY0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AC097658.1-201ENST00000475555 843 ntBASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AL589935.2-201ENST00000616471 1231 ntBASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.11■□□□□ 0.49
BLOC1S3Q6QNY0 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms