Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.53■□□□□ 0.24
C11orf88Q6PI97 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.52■□□□□ 0.24
C11orf88Q6PI97 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
C11orf88Q6PI97 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 MIPEPP3-201ENST00000412105 444 ntBASIC16.51■□□□□ 0.23
C11orf88Q6PI97 AC091799.1-201ENST00000422823 811 ntBASIC16.51■□□□□ 0.23
C11orf88Q6PI97 AC007322.3-201ENST00000426526 701 ntBASIC16.51■□□□□ 0.23
C11orf88Q6PI97 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.51■□□□□ 0.23
C11orf88Q6PI97 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.5■□□□□ 0.23
C11orf88Q6PI97 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 AP000997.3-201ENST00000623333 2250 ntBASIC16.5■□□□□ 0.23
C11orf88Q6PI97 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
C11orf88Q6PI97 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms