Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 KRT16P5-201ENST00000455284 522 ntBASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AC098590.1-201ENST00000468126 897 ntBASIC17.3■□□□□ 0.36
NIPAL3Q6P499 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 TMEM191A-211ENST00000637163 1067 ntBASIC17.3■□□□□ 0.36
NIPAL3Q6P499 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AC104417.2-201ENST00000562989 1793 ntBASIC17.3■□□□□ 0.36
NIPAL3Q6P499 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AC007613.1-201ENST00000572811 2597 ntBASIC17.3■□□□□ 0.36
NIPAL3Q6P499 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 FP475955.4-201ENST00000623131 1990 ntBASIC17.29■□□□□ 0.36
NIPAL3Q6P499 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NIPAL3Q6P499 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 WIZP1-201ENST00000531444 2299 ntBASIC17.28■□□□□ 0.36
NIPAL3Q6P499 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.28■□□□□ 0.36
NIPAL3Q6P499 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.28■□□□□ 0.36
NIPAL3Q6P499 Z98044.1-201ENST00000632503 1764 ntBASIC17.28■□□□□ 0.36
NIPAL3Q6P499 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 GCSHP5-201ENST00000443090 522 ntBASIC17.27■□□□□ 0.36
NIPAL3Q6P499 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.27■□□□□ 0.36
NIPAL3Q6P499 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms