Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 Z98044.1-201ENST00000632503 1764 ntBASIC16.61■□□□□ 0.25
HIST1H3AP68431 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.61■□□□□ 0.25
HIST1H3AP68431 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
HIST1H3AP68431 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.6■□□□□ 0.25
HIST1H3AP68431 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 AC008040.2-201ENST00000461049 708 ntBASIC16.6■□□□□ 0.25
HIST1H3AP68431 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HIST1H3AP68431 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
HIST1H3AP68431 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 AL512353.2-201ENST00000448759 1962 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 MESTP1-201ENST00000404287 994 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 UBE2SP1-201ENST00000450587 669 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 AC011506.1-201ENST00000474329 610 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 MIR6786-201ENST00000616843 113 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 AC011298.2-201ENST00000617989 482 ntBASIC16.59■□□□□ 0.25
HIST1H3AP68431 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HIST1H3AP68431 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
HIST1H3AP68431 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms