Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
PEX3P56589 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.94■□□□□ 0.94
PEX3P56589 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.94■□□□□ 0.94
PEX3P56589 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.94■□□□□ 0.94
PEX3P56589 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.94■□□□□ 0.94
PEX3P56589 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC20.94■□□□□ 0.94
PEX3P56589 AC097493.4-201ENST00000641197 219 ntBASIC20.94■□□□□ 0.94
PEX3P56589 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.94■□□□□ 0.94
PEX3P56589 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PEX3P56589 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.93■□□□□ 0.94
PEX3P56589 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.93■□□□□ 0.94
PEX3P56589 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.93■□□□□ 0.94
PEX3P56589 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.93■□□□□ 0.94
PEX3P56589 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.93■□□□□ 0.94
PEX3P56589 CCR12P-201ENST00000446203 998 ntBASIC20.93■□□□□ 0.94
PEX3P56589 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 LINC01023-201ENST00000606054 436 ntBASIC20.93■□□□□ 0.94
PEX3P56589 AC116562.4-202ENST00000641738 218 ntBASIC20.93■□□□□ 0.94
PEX3P56589 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.93■□□□□ 0.94
PEX3P56589 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
PEX3P56589 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
PEX3P56589 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.93■□□□□ 0.94
PEX3P56589 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
PEX3P56589 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.92■□□□□ 0.94
PEX3P56589 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.92■□□□□ 0.94
PEX3P56589 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
PEX3P56589 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
PEX3P56589 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 ECEL1P2-202ENST00000465689 757 ntBASIC20.92■□□□□ 0.94
PEX3P56589 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.92■□□□□ 0.94
PEX3P56589 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
PEX3P56589 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PEX3P56589 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
PEX3P56589 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PEX3P56589 KRT18P22-201ENST00000402024 1347 ntBASIC20.91■□□□□ 0.94
PEX3P56589 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.91■□□□□ 0.94
PEX3P56589 AC007663.1-201ENST00000438948 1240 ntBASIC20.91■□□□□ 0.94
PEX3P56589 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
PEX3P56589 TSPY17P-201ENST00000450329 467 ntBASIC20.91■□□□□ 0.94
PEX3P56589 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.91■□□□□ 0.94
PEX3P56589 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 AL353719.1-201ENST00000566847 864 ntBASIC20.91■□□□□ 0.94
PEX3P56589 AC092338.2-201ENST00000568827 1415 ntBASIC20.91■□□□□ 0.94
PEX3P56589 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.91■□□□□ 0.94
PEX3P56589 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PEX3P56589 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PEX3P56589 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PEX3P56589 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.9■□□□□ 0.94
PEX3P56589 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.9■□□□□ 0.94
PEX3P56589 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PEX3P56589 AC128688.1-201ENST00000487626 519 ntBASIC20.9■□□□□ 0.94
PEX3P56589 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.9■□□□□ 0.94
PEX3P56589 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
PEX3P56589 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms