Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AL596275.1-201ENST00000423464 877 ntBASIC17.23■□□□□ 0.35
SUMO3P55854 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.23■□□□□ 0.35
SUMO3P55854 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.23■□□□□ 0.35
SUMO3P55854 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.23■□□□□ 0.35
SUMO3P55854 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.23■□□□□ 0.35
SUMO3P55854 AP000525.1-201ENST00000608286 694 ntBASIC17.23■□□□□ 0.35
SUMO3P55854 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.23■□□□□ 0.35
SUMO3P55854 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.23■□□□□ 0.35
SUMO3P55854 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.23■□□□□ 0.35
SUMO3P55854 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SUMO3P55854 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SUMO3P55854 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SUMO3P55854 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SUMO3P55854 AC079598.2-202ENST00000546624 1451 ntBASIC17.23■□□□□ 0.35
SUMO3P55854 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
SUMO3P55854 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SUMO3P55854 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SUMO3P55854 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SUMO3P55854 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.22■□□□□ 0.35
SUMO3P55854 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.22■□□□□ 0.35
SUMO3P55854 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SUMO3P55854 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SUMO3P55854 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.22■□□□□ 0.35
SUMO3P55854 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.22■□□□□ 0.35
SUMO3P55854 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.21■□□□□ 0.35
SUMO3P55854 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.21■□□□□ 0.35
SUMO3P55854 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SUMO3P55854 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SUMO3P55854 SLC25A1P2-201ENST00000430693 912 ntBASIC17.21■□□□□ 0.35
SUMO3P55854 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.21■□□□□ 0.35
SUMO3P55854 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.21■□□□□ 0.35
SUMO3P55854 C2orf69P3-201ENST00000565542 1120 ntBASIC17.21■□□□□ 0.35
SUMO3P55854 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.21■□□□□ 0.35
SUMO3P55854 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.21■□□□□ 0.35
SUMO3P55854 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SUMO3P55854 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SUMO3P55854 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
SUMO3P55854 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SUMO3P55854 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.21■□□□□ 0.34
SUMO3P55854 AL049812.1-201ENST00000432563 2267 ntBASIC17.21■□□□□ 0.34
SUMO3P55854 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.2■□□□□ 0.34
SUMO3P55854 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.2■□□□□ 0.34
SUMO3P55854 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.2■□□□□ 0.34
SUMO3P55854 MIR1238-201ENST00000408483 83 ntBASIC17.2■□□□□ 0.34
SUMO3P55854 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.2■□□□□ 0.34
SUMO3P55854 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.2■□□□□ 0.34
SUMO3P55854 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SUMO3P55854 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SUMO3P55854 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SUMO3P55854 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
SUMO3P55854 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.19■□□□□ 0.34
SUMO3P55854 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.19■□□□□ 0.34
SUMO3P55854 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SUMO3P55854 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SUMO3P55854 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SUMO3P55854 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.19■□□□□ 0.34
SUMO3P55854 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.19■□□□□ 0.34
SUMO3P55854 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.19■□□□□ 0.34
SUMO3P55854 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms