Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF144AP50876 FP475955.4-201ENST00000623131 1990 ntBASIC17.66■□□□□ 0.42
RNF144AP50876 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 IRX1P1-201ENST00000438849 1838 ntBASIC17.66■□□□□ 0.42
RNF144AP50876 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF144AP50876 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF144AP50876 AP002982.1-201ENST00000492365 877 ntBASIC17.66■□□□□ 0.42
RNF144AP50876 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF144AP50876 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF144AP50876 AL160286.2-201ENST00000567150 934 ntBASIC17.66■□□□□ 0.42
RNF144AP50876 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF144AP50876 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF144AP50876 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
RNF144AP50876 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF144AP50876 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF144AP50876 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF144AP50876 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF144AP50876 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF144AP50876 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.65■□□□□ 0.42
RNF144AP50876 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RNF144AP50876 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF144AP50876 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
RNF144AP50876 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF144AP50876 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
RNF144AP50876 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF144AP50876 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF144AP50876 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF144AP50876 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF144AP50876 GCSHP5-201ENST00000443090 522 ntBASIC17.64■□□□□ 0.41
RNF144AP50876 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF144AP50876 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF144AP50876 CR392000.1-201ENST00000624770 1228 ntBASIC17.64■□□□□ 0.41
RNF144AP50876 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF144AP50876 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF144AP50876 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF144AP50876 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF144AP50876 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
RNF144AP50876 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RNF144AP50876 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RNF144AP50876 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms