Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.93■□□□□ 0.62
CXCL12P48061 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CXCL12P48061 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CXCL12P48061 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 AC090616.6-201ENST00000582640 721 ntBASIC18.93■□□□□ 0.62
CXCL12P48061 SLC25A6P4-201ENST00000586535 553 ntBASIC18.93■□□□□ 0.62
CXCL12P48061 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXCL12P48061 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CXCL12P48061 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CXCL12P48061 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CXCL12P48061 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.92■□□□□ 0.62
CXCL12P48061 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.92■□□□□ 0.62
CXCL12P48061 AL121912.1-201ENST00000603683 238 ntBASIC18.92■□□□□ 0.62
CXCL12P48061 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.92■□□□□ 0.62
CXCL12P48061 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.92■□□□□ 0.62
CXCL12P48061 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 Z83836.1-201ENST00000624605 1642 ntBASIC18.92■□□□□ 0.62
CXCL12P48061 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CXCL12P48061 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CXCL12P48061 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCL12P48061 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCL12P48061 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.91■□□□□ 0.62
CXCL12P48061 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.91■□□□□ 0.62
CXCL12P48061 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.91■□□□□ 0.62
CXCL12P48061 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.91■□□□□ 0.62
CXCL12P48061 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.91■□□□□ 0.62
CXCL12P48061 IGHV3-41-201ENST00000613121 348 ntBASIC18.91■□□□□ 0.62
CXCL12P48061 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.91■□□□□ 0.62
CXCL12P48061 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CXCL12P48061 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.91■□□□□ 0.62
CXCL12P48061 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CXCL12P48061 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CXCL12P48061 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCL12P48061 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CXCL12P48061 AC074051.2-201ENST00000565115 352 ntBASIC18.9■□□□□ 0.62
CXCL12P48061 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCL12P48061 AC138894.3-201ENST00000603787 634 ntBASIC18.9■□□□□ 0.62
CXCL12P48061 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.9■□□□□ 0.62
CXCL12P48061 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
CXCL12P48061 KRT8P3-201ENST00000519669 1449 ntBASIC18.9■□□□□ 0.62
CXCL12P48061 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CXCL12P48061 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.9■□□□□ 0.62
CXCL12P48061 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
CXCL12P48061 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CXCL12P48061 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.89■□□□□ 0.61
CXCL12P48061 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CXCL12P48061 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms