Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.18■□□□□ 0.66
CHRNA4P43681 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CHRNA4P43681 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHRNA4P43681 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CHRNA4P43681 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.18■□□□□ 0.66
CHRNA4P43681 CROCCP3-202ENST00000420820 1947 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 FSCN1P1-201ENST00000568912 1481 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 FAM207BP-201ENST00000447172 505 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 AC116562.2-201ENST00000507042 360 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.17■□□□□ 0.66
CHRNA4P43681 AP001412.1-201ENST00000608405 714 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 REXO1L10P-201ENST00000615707 1290 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 REXO1L12P-201ENST00000622156 912 ntBASIC19.17■□□□□ 0.66
CHRNA4P43681 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CHRNA4P43681 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA4P43681 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CHRNA4P43681 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.17■□□□□ 0.66
CHRNA4P43681 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CHRNA4P43681 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.17■□□□□ 0.66
CHRNA4P43681 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA4P43681 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA4P43681 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA4P43681 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CHRNA4P43681 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA4P43681 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA4P43681 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.16■□□□□ 0.66
CHRNA4P43681 AC026471.5-201ENST00000615068 467 ntBASIC19.16■□□□□ 0.66
CHRNA4P43681 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CHRNA4P43681 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.16■□□□□ 0.66
CHRNA4P43681 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.16■□□□□ 0.66
CHRNA4P43681 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CHRNA4P43681 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA4P43681 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA4P43681 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA4P43681 MIR718-201ENST00000390190 70 ntBASIC19.15■□□□□ 0.66
CHRNA4P43681 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CHRNA4P43681 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.15■□□□□ 0.66
CHRNA4P43681 SNORA78-201ENST00000459373 127 ntBASIC19.15■□□□□ 0.66
CHRNA4P43681 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.15■□□□□ 0.66
CHRNA4P43681 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.15■□□□□ 0.66
CHRNA4P43681 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC19.15■□□□□ 0.66
CHRNA4P43681 PRSS44-201ENST00000515154 1146 ntBASIC19.15■□□□□ 0.66
CHRNA4P43681 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CHRNA4P43681 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.15■□□□□ 0.66
CHRNA4P43681 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CHRNA4P43681 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CHRNA4P43681 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA4P43681 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CHRNA4P43681 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.14■□□□□ 0.66
CHRNA4P43681 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA4P43681 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA4P43681 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CHRNA4P43681 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA4P43681 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA4P43681 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.14■□□□□ 0.65
CHRNA4P43681 AL355355.2-201ENST00000442321 338 ntBASIC19.14■□□□□ 0.65
CHRNA4P43681 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.14■□□□□ 0.65
CHRNA4P43681 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA4P43681 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CHRNA4P43681 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms