Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC6A4P31645 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.51■□□□□ 0.71
SLC6A4P31645 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 GPAT2P1-201ENST00000444924 1672 ntBASIC19.51■□□□□ 0.71
SLC6A4P31645 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SLC6A4P31645 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SLC6A4P31645 KRT8P3-201ENST00000519669 1449 ntBASIC19.51■□□□□ 0.71
SLC6A4P31645 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SLC6A4P31645 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC6A4P31645 FP475955.4-201ENST00000623131 1990 ntBASIC19.5■□□□□ 0.71
SLC6A4P31645 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.5■□□□□ 0.71
SLC6A4P31645 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC6A4P31645 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC6A4P31645 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 AC141257.4-201ENST00000634557 245 ntBASIC19.5■□□□□ 0.71
SLC6A4P31645 AC136944.6-201ENST00000634818 245 ntBASIC19.5■□□□□ 0.71
SLC6A4P31645 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
SLC6A4P31645 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SLC6A4P31645 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC6A4P31645 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.5■□□□□ 0.71
SLC6A4P31645 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SLC6A4P31645 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A4P31645 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC6A4P31645 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A4P31645 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC6A4P31645 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC6A4P31645 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC6A4P31645 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SLC6A4P31645 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC6A4P31645 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 AC117947.1-201ENST00000427448 529 ntBASIC19.48■□□□□ 0.71
SLC6A4P31645 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A4P31645 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC6A4P31645 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC6A4P31645 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC6A4P31645 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SLC6A4P31645 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A4P31645 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SLC6A4P31645 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC6A4P31645 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC19.47■□□□□ 0.71
SLC6A4P31645 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC6A4P31645 AL023284.2-201ENST00000405850 579 ntBASIC19.47■□□□□ 0.71
SLC6A4P31645 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.47■□□□□ 0.71
SLC6A4P31645 BX664615.1-201ENST00000443558 458 ntBASIC19.47■□□□□ 0.71
SLC6A4P31645 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms