Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
CD40P25942 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD40P25942 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CD40P25942 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CD40P25942 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD40P25942 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CD40P25942 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CD40P25942 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.39■□□□□ 0.21
CD40P25942 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CD40P25942 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 RNF152P1-201ENST00000397754 604 ntBASIC16.39■□□□□ 0.21
CD40P25942 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.39■□□□□ 0.21
CD40P25942 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.39■□□□□ 0.21
CD40P25942 YBX1P2-201ENST00000489612 999 ntBASIC16.39■□□□□ 0.21
CD40P25942 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.39■□□□□ 0.21
CD40P25942 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.39■□□□□ 0.21
CD40P25942 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CD40P25942 NT5C-211ENST00000582170 653 ntTSL 3 BASIC16.39■□□□□ 0.21
CD40P25942 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.39■□□□□ 0.21
CD40P25942 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.39■□□□□ 0.21
CD40P25942 AL031432.5-201ENST00000641059 760 ntBASIC16.39■□□□□ 0.21
CD40P25942 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CD40P25942 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.38■□□□□ 0.21
CD40P25942 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD40P25942 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CD40P25942 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.38■□□□□ 0.21
CD40P25942 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.38■□□□□ 0.21
CD40P25942 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 AC063952.2-201ENST00000498792 1227 ntBASIC16.38■□□□□ 0.21
CD40P25942 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.38■□□□□ 0.21
CD40P25942 LINC01238-205ENST00000567549 1107 ntBASIC16.38■□□□□ 0.21
CD40P25942 WWOX-216ENST00000569818 525 ntBASIC16.38■□□□□ 0.21
CD40P25942 NTF6B-201ENST00000591913 560 ntBASIC16.38■□□□□ 0.21
CD40P25942 AC140113.3-201ENST00000605663 199 ntBASIC16.38■□□□□ 0.21
CD40P25942 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CD40P25942 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
CD40P25942 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.38■□□□□ 0.21
CD40P25942 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CD40P25942 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 TEX21P-204ENST00000641479 1693 ntBASIC16.37■□□□□ 0.21
CD40P25942 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 AFG3L1P-217ENST00000557444 2447 ntBASIC16.37■□□□□ 0.21
CD40P25942 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.37■□□□□ 0.21
CD40P25942 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.37■□□□□ 0.21
CD40P25942 TSPY5P-201ENST00000426936 936 ntBASIC16.37■□□□□ 0.21
CD40P25942 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 AC022616.7-201ENST00000525383 220 ntBASIC16.37■□□□□ 0.21
CD40P25942 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.37■□□□□ 0.21
CD40P25942 MIR4674-201ENST00000582457 87 ntBASIC16.37■□□□□ 0.21
CD40P25942 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.37■□□□□ 0.21
CD40P25942 AC008622.2-201ENST00000617006 1229 ntBASIC16.37■□□□□ 0.21
CD40P25942 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.37■□□□□ 0.21
CD40P25942 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.37■□□□□ 0.21
CD40P25942 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CD40P25942 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms