Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.96■□□□□ 0.47
NCK1P16333 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 AC005829.2-201ENST00000571422 1056 ntBASIC17.96■□□□□ 0.47
NCK1P16333 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.96■□□□□ 0.47
NCK1P16333 AC126763.1-201ENST00000552015 2118 ntBASIC17.96■□□□□ 0.47
NCK1P16333 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.96■□□□□ 0.47
NCK1P16333 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.96■□□□□ 0.47
NCK1P16333 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NCK1P16333 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
NCK1P16333 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
NCK1P16333 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.96■□□□□ 0.46
NCK1P16333 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.96■□□□□ 0.46
NCK1P16333 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.95■□□□□ 0.46
NCK1P16333 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.95■□□□□ 0.46
NCK1P16333 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NCK1P16333 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.95■□□□□ 0.46
NCK1P16333 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
NCK1P16333 ABALON-201ENST00000629058 1903 ntBASIC17.95■□□□□ 0.46
NCK1P16333 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
NCK1P16333 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.95■□□□□ 0.46
NCK1P16333 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NCK1P16333 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.94■□□□□ 0.46
NCK1P16333 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.94■□□□□ 0.46
NCK1P16333 RPS2P52-201ENST00000469610 820 ntBASIC17.94■□□□□ 0.46
NCK1P16333 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.94■□□□□ 0.46
NCK1P16333 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.94■□□□□ 0.46
NCK1P16333 AC083906.6-201ENST00000641366 219 ntBASIC17.94■□□□□ 0.46
NCK1P16333 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.94■□□□□ 0.46
NCK1P16333 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
NCK1P16333 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NCK1P16333 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.94■□□□□ 0.46
NCK1P16333 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
NCK1P16333 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NCK1P16333 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.93■□□□□ 0.46
NCK1P16333 AP006587.1-201ENST00000534129 1502 ntBASIC17.93■□□□□ 0.46
NCK1P16333 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
NCK1P16333 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
NCK1P16333 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NCK1P16333 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms