Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBCP0CG48 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.67■□□□□ 0.26
UBCP0CG48 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.67■□□□□ 0.26
UBCP0CG48 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.67■□□□□ 0.26
UBCP0CG48 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.67■□□□□ 0.26
UBCP0CG48 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.67■□□□□ 0.26
UBCP0CG48 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC16.67■□□□□ 0.26
UBCP0CG48 AC008687.6-201ENST00000596318 630 ntBASIC16.67■□□□□ 0.26
UBCP0CG48 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.67■□□□□ 0.26
UBCP0CG48 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
UBCP0CG48 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 WIZP1-201ENST00000531444 2299 ntBASIC16.67■□□□□ 0.26
UBCP0CG48 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
UBCP0CG48 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.67■□□□□ 0.26
UBCP0CG48 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
UBCP0CG48 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.67■□□□□ 0.26
UBCP0CG48 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
UBCP0CG48 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
UBCP0CG48 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 AC090164.3-201ENST00000610780 2143 ntBASIC16.66■□□□□ 0.26
UBCP0CG48 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.66■□□□□ 0.26
UBCP0CG48 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.66■□□□□ 0.26
UBCP0CG48 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.66■□□□□ 0.26
UBCP0CG48 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.66■□□□□ 0.26
UBCP0CG48 AC083906.6-201ENST00000641366 219 ntBASIC16.66■□□□□ 0.26
UBCP0CG48 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.66■□□□□ 0.26
UBCP0CG48 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.66■□□□□ 0.26
UBCP0CG48 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UBCP0CG48 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
UBCP0CG48 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.65■□□□□ 0.26
UBCP0CG48 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.65■□□□□ 0.26
UBCP0CG48 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.65■□□□□ 0.26
UBCP0CG48 TSPY21P-201ENST00000433481 731 ntBASIC16.65■□□□□ 0.26
UBCP0CG48 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.65■□□□□ 0.26
UBCP0CG48 AL138781.1-201ENST00000566567 1274 ntBASIC16.65■□□□□ 0.26
UBCP0CG48 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 AC083880.1-201ENST00000608266 535 ntBASIC16.65■□□□□ 0.26
UBCP0CG48 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBCP0CG48 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBCP0CG48 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.65■□□□□ 0.26
UBCP0CG48 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.65■□□□□ 0.26
UBCP0CG48 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBCP0CG48 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
UBCP0CG48 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.64■□□□□ 0.25
UBCP0CG48 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBCP0CG48 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBCP0CG48 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UBCP0CG48 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBCP0CG48 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms