Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.17■□□□□ 0.66
RETP07949 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.17■□□□□ 0.66
RETP07949 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.17■□□□□ 0.66
RETP07949 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.17■□□□□ 0.66
RETP07949 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
RETP07949 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.17■□□□□ 0.66
RETP07949 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RETP07949 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
RETP07949 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RETP07949 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.16■□□□□ 0.66
RETP07949 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.16■□□□□ 0.66
RETP07949 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.16■□□□□ 0.66
RETP07949 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RETP07949 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.16■□□□□ 0.66
RETP07949 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RETP07949 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RETP07949 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RETP07949 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 AP000593.1-201ENST00000393668 712 ntBASIC19.15■□□□□ 0.66
RETP07949 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.15■□□□□ 0.66
RETP07949 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.15■□□□□ 0.66
RETP07949 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.15■□□□□ 0.66
RETP07949 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RETP07949 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.15■□□□□ 0.66
RETP07949 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.15■□□□□ 0.66
RETP07949 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.15■□□□□ 0.66
RETP07949 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RETP07949 AC004263.2-201ENST00000617183 678 ntBASIC19.15■□□□□ 0.66
RETP07949 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.15■□□□□ 0.66
RETP07949 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RETP07949 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RETP07949 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
RETP07949 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RETP07949 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RETP07949 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.14■□□□□ 0.65
RETP07949 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.14■□□□□ 0.65
RETP07949 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.14■□□□□ 0.65
RETP07949 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.14■□□□□ 0.65
RETP07949 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.14■□□□□ 0.65
RETP07949 GCSHP2-201ENST00000560971 527 ntBASIC19.14■□□□□ 0.65
RETP07949 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
RETP07949 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
RETP07949 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RETP07949 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.14■□□□□ 0.65
RETP07949 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RETP07949 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RETP07949 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.13■□□□□ 0.65
RETP07949 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.13■□□□□ 0.65
RETP07949 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RETP07949 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.13■□□□□ 0.65
RETP07949 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.13■□□□□ 0.65
RETP07949 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.13■□□□□ 0.65
RETP07949 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RETP07949 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.13■□□□□ 0.65
RETP07949 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.13■□□□□ 0.65
RETP07949 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.13■□□□□ 0.65
RETP07949 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RETP07949 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RETP07949 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms