Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.8■□□□□ 0.12
CTSDP07339 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC15.8■□□□□ 0.12
CTSDP07339 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CTSDP07339 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CTSDP07339 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CTSDP07339 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 AL512625.2-201ENST00000417533 625 ntBASIC15.79■□□□□ 0.12
CTSDP07339 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CTSDP07339 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.79■□□□□ 0.12
CTSDP07339 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.79■□□□□ 0.12
CTSDP07339 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.79■□□□□ 0.12
CTSDP07339 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC15.79■□□□□ 0.12
CTSDP07339 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTSDP07339 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 PODN-203ENST00000395871 2744 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSDP07339 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.78■□□□□ 0.12
CTSDP07339 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSDP07339 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 AC016769.1-201ENST00000409132 1010 ntBASIC15.78■□□□□ 0.12
CTSDP07339 LSM12P1-201ENST00000411836 588 ntBASIC15.78■□□□□ 0.12
CTSDP07339 YBX1P10-201ENST00000444752 975 ntBASIC15.78■□□□□ 0.12
CTSDP07339 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSDP07339 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.78■□□□□ 0.12
CTSDP07339 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.78■□□□□ 0.12
CTSDP07339 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CTSDP07339 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CTSDP07339 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTSDP07339 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTSDP07339 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC15.77■□□□□ 0.12
CTSDP07339 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSDP07339 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.77■□□□□ 0.12
CTSDP07339 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSDP07339 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSDP07339 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CTSDP07339 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.77■□□□□ 0.12
CTSDP07339 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 PARL-206ENST00000435888 1098 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSDP07339 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.77■□□□□ 0.12
CTSDP07339 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.77■□□□□ 0.12
CTSDP07339 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.77■□□□□ 0.12
CTSDP07339 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.77■□□□□ 0.12
CTSDP07339 AC231657.2-201ENST00000624556 255 ntBASIC15.77■□□□□ 0.12
CTSDP07339 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.77■□□□□ 0.12
CTSDP07339 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTSDP07339 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.77■□□□□ 0.11
CTSDP07339 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CTSDP07339 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms