Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC21.31■■□□□ 1
TPM3P06753 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TPM3P06753 TFP1-202ENST00000475455 1573 ntBASIC21.31■■□□□ 1
TPM3P06753 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
TPM3P06753 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.31■■□□□ 1
TPM3P06753 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
TPM3P06753 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.31■■□□□ 1
TPM3P06753 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
TPM3P06753 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC21.31■■□□□ 1
TPM3P06753 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
TPM3P06753 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
TPM3P06753 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.3■■□□□ 1
TPM3P06753 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.3■■□□□ 1
TPM3P06753 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC21.3■■□□□ 1
TPM3P06753 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.3■■□□□ 1
TPM3P06753 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
TPM3P06753 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC21.3■■□□□ 1
TPM3P06753 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.3■■□□□ 1
TPM3P06753 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 AC067852.2-201ENST00000590513 2313 ntBASIC21.29■■□□□ 1
TPM3P06753 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC21.29■■□□□ 1
TPM3P06753 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC21.29■■□□□ 1
TPM3P06753 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.29■■□□□ 1
TPM3P06753 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 AC231657.2-201ENST00000624556 255 ntBASIC21.29■■□□□ 1
TPM3P06753 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.29■■□□□ 1
TPM3P06753 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC21.29■■□□□ 1
TPM3P06753 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
TPM3P06753 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
TPM3P06753 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TPM3P06753 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.29■■□□□ 1
TPM3P06753 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC21.29■■□□□ 1
TPM3P06753 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.28■■□□□ 1
TPM3P06753 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.28■■□□□ 1
TPM3P06753 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM3P06753 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.28■■□□□ 1
TPM3P06753 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC21.28■■□□□ 1
TPM3P06753 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.28■■□□□ 1
TPM3P06753 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
TPM3P06753 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM3P06753 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
TPM3P06753 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.28■■□□□ 1
TPM3P06753 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
TPM3P06753 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.28■■□□□ 1
TPM3P06753 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC21.27■■□□□ 1
TPM3P06753 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.27■■□□□ 1
TPM3P06753 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC21.27■■□□□ 1
TPM3P06753 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.27■■□□□ 1
TPM3P06753 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.27■■□□□ 1
TPM3P06753 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.27■■□□□ 1
TPM3P06753 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.27■■□□□ 1
TPM3P06753 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.27■■□□□ 1
TPM3P06753 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.27■■□□□ 1
TPM3P06753 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC21.27■■□□□ 1
TPM3P06753 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
TPM3P06753 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.27■■□□□ 1
TPM3P06753 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TPM3P06753 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC21.27■■□□□ 1
TPM3P06753 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
TPM3P06753 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
TPM3P06753 AL162741.1-201ENST00000565563 1558 ntBASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms