Protein–RNA interactions for Protein: P06028

GYPB, Glycophorin-B, humanhuman

Predictions only

Length 91 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GYPBP06028 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GYPBP06028 AC026471.1-201ENST00000564629 3026 ntBASIC17.07■□□□□ 0.32
GYPBP06028 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GYPBP06028 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
GYPBP06028 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.07■□□□□ 0.32
GYPBP06028 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.07■□□□□ 0.32
GYPBP06028 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 AL109923.1-201ENST00000618799 583 ntBASIC17.07■□□□□ 0.32
GYPBP06028 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 AC090340.1-201ENST00000620778 4980 ntBASIC17.07■□□□□ 0.32
GYPBP06028 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
GYPBP06028 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GYPBP06028 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.07■□□□□ 0.32
GYPBP06028 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GYPBP06028 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GYPBP06028 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.06■□□□□ 0.32
GYPBP06028 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 AC005332.8-201ENST00000622750 2735 ntBASIC17.06■□□□□ 0.32
GYPBP06028 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
GYPBP06028 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GYPBP06028 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GYPBP06028 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.05■□□□□ 0.32
GYPBP06028 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC17.05■□□□□ 0.32
GYPBP06028 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.05■□□□□ 0.32
GYPBP06028 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
GYPBP06028 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 AC069152.1-201ENST00000438030 544 ntBASIC17.05■□□□□ 0.32
GYPBP06028 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.05■□□□□ 0.32
GYPBP06028 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.05■□□□□ 0.32
GYPBP06028 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.05■□□□□ 0.32
GYPBP06028 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.05■□□□□ 0.32
GYPBP06028 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GYPBP06028 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms