Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.43■□□□□ 0.22
HLA-DQB1P01920 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 TFP1-202ENST00000475455 1573 ntBASIC16.42■□□□□ 0.22
HLA-DQB1P01920 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.42■□□□□ 0.22
HLA-DQB1P01920 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 NTF6G-201ENST00000591094 616 ntBASIC16.41■□□□□ 0.22
HLA-DQB1P01920 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HLA-DQB1P01920 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 KRT18P11-201ENST00000435214 1283 ntBASIC16.4■□□□□ 0.22
HLA-DQB1P01920 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.4■□□□□ 0.22
HLA-DQB1P01920 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms