Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TIMP1P01033 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TIMP1P01033 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TIMP1P01033 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
TIMP1P01033 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 MIR574-201ENST00000385209 96 ntBASIC20.56■□□□□ 0.88
TIMP1P01033 KRT18P13-201ENST00000400056 1290 ntBASIC20.56■□□□□ 0.88
TIMP1P01033 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.56■□□□□ 0.88
TIMP1P01033 IGHV3-47-201ENST00000425060 335 ntBASIC20.56■□□□□ 0.88
TIMP1P01033 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.56■□□□□ 0.88
TIMP1P01033 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 AC064862.7-201ENST00000604520 867 ntBASIC20.56■□□□□ 0.88
TIMP1P01033 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TIMP1P01033 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.56■□□□□ 0.88
TIMP1P01033 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.56■□□□□ 0.88
TIMP1P01033 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TIMP1P01033 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.55■□□□□ 0.88
TIMP1P01033 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.55■□□□□ 0.88
TIMP1P01033 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 SAPCD2P3-201ENST00000455031 850 ntBASIC20.55■□□□□ 0.88
TIMP1P01033 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.55■□□□□ 0.88
TIMP1P01033 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.55■□□□□ 0.88
TIMP1P01033 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.55■□□□□ 0.88
TIMP1P01033 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.55■□□□□ 0.88
TIMP1P01033 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.55■□□□□ 0.88
TIMP1P01033 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TIMP1P01033 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.54■□□□□ 0.88
TIMP1P01033 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.54■□□□□ 0.88
TIMP1P01033 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 KRT8P7-201ENST00000533003 1432 ntBASIC20.54■□□□□ 0.88
TIMP1P01033 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TIMP1P01033 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.54■□□□□ 0.88
TIMP1P01033 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.54■□□□□ 0.88
TIMP1P01033 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TIMP1P01033 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.54■□□□□ 0.88
TIMP1P01033 AC104390.1-201ENST00000555663 520 ntBASIC20.54■□□□□ 0.88
TIMP1P01033 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.54■□□□□ 0.88
TIMP1P01033 SDHAP1-207ENST00000440850 2000 ntBASIC20.54■□□□□ 0.88
TIMP1P01033 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TIMP1P01033 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.53■□□□□ 0.88
TIMP1P01033 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.53■□□□□ 0.88
TIMP1P01033 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 KRT18P23-201ENST00000435622 1283 ntBASIC20.53■□□□□ 0.88
TIMP1P01033 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.53■□□□□ 0.88
TIMP1P01033 AC010240.3-201ENST00000607688 395 ntBASIC20.53■□□□□ 0.88
TIMP1P01033 REXO1L6P-202ENST00000619970 1078 ntBASIC20.53■□□□□ 0.88
TIMP1P01033 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TIMP1P01033 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
TIMP1P01033 IL9RP2-201ENST00000423948 1312 ntBASIC20.53■□□□□ 0.88
TIMP1P01033 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TIMP1P01033 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TIMP1P01033 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.52■□□□□ 0.88
TIMP1P01033 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TIMP1P01033 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.52■□□□□ 0.88
TIMP1P01033 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.52■□□□□ 0.88
TIMP1P01033 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.52■□□□□ 0.88
TIMP1P01033 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms