Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.48■■□□□ 1.03
SMC2O95347 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.48■■□□□ 1.03
SMC2O95347 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC21.48■■□□□ 1.03
SMC2O95347 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SMC2O95347 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 AC018470.1-201ENST00000624790 3129 ntBASIC21.48■■□□□ 1.03
SMC2O95347 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SMC2O95347 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SMC2O95347 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.47■■□□□ 1.03
SMC2O95347 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.47■■□□□ 1.03
SMC2O95347 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SMC2O95347 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.47■■□□□ 1.03
SMC2O95347 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SMC2O95347 PRKY-204ENST00000533551 1019 ntBASIC21.47■■□□□ 1.03
SMC2O95347 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 AC104771.1-201ENST00000603335 964 ntBASIC21.47■■□□□ 1.03
SMC2O95347 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.47■■□□□ 1.03
SMC2O95347 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.47■■□□□ 1.03
SMC2O95347 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
SMC2O95347 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SMC2O95347 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 FEM1AP3-201ENST00000403722 1741 ntBASIC21.46■■□□□ 1.03
SMC2O95347 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SMC2O95347 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 POM121L13P-201ENST00000422362 380 ntBASIC21.46■■□□□ 1.03
SMC2O95347 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.46■■□□□ 1.03
SMC2O95347 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.46■■□□□ 1.03
SMC2O95347 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 AC005332.8-201ENST00000622750 2735 ntBASIC21.46■■□□□ 1.03
SMC2O95347 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.46■■□□□ 1.03
SMC2O95347 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SMC2O95347 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SMC2O95347 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.03
SMC2O95347 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.45■■□□□ 1.03
SMC2O95347 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SMC2O95347 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SMC2O95347 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SMC2O95347 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
SMC2O95347 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.45■■□□□ 1.02
SMC2O95347 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
SMC2O95347 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.45■■□□□ 1.02
SMC2O95347 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.45■■□□□ 1.02
SMC2O95347 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SMC2O95347 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms