Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN3O95197 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.02■□□□□ 0.79
RTN3O95197 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.02■□□□□ 0.79
RTN3O95197 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RTN3O95197 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RTN3O95197 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
RTN3O95197 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN3O95197 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.01■□□□□ 0.79
RTN3O95197 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
RTN3O95197 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.01■□□□□ 0.79
RTN3O95197 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RTN3O95197 KRT18P57-201ENST00000443599 1254 ntBASIC20.01■□□□□ 0.79
RTN3O95197 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 AC010203.1-204ENST00000548782 407 ntBASIC20.01■□□□□ 0.79
RTN3O95197 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.01■□□□□ 0.79
RTN3O95197 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.01■□□□□ 0.79
RTN3O95197 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
RTN3O95197 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
RTN3O95197 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RTN3O95197 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20■□□□□ 0.79
RTN3O95197 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20■□□□□ 0.79
RTN3O95197 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20■□□□□ 0.79
RTN3O95197 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20■□□□□ 0.79
RTN3O95197 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20■□□□□ 0.79
RTN3O95197 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20■□□□□ 0.79
RTN3O95197 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20■□□□□ 0.79
RTN3O95197 MIR1224-201ENST00000408193 85 ntBASIC20■□□□□ 0.79
RTN3O95197 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20■□□□□ 0.79
RTN3O95197 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20■□□□□ 0.79
RTN3O95197 AL512604.3-201ENST00000569583 964 ntBASIC20■□□□□ 0.79
RTN3O95197 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
RTN3O95197 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20■□□□□ 0.79
RTN3O95197 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RTN3O95197 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN3O95197 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
RTN3O95197 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN3O95197 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTN3O95197 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.99■□□□□ 0.79
RTN3O95197 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.99■□□□□ 0.79
RTN3O95197 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
RTN3O95197 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.99■□□□□ 0.79
RTN3O95197 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RTN3O95197 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.99■□□□□ 0.79
RTN3O95197 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN3O95197 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
RTN3O95197 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN3O95197 AP003041.3-201ENST00000527151 707 ntBASIC19.98■□□□□ 0.79
RTN3O95197 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN3O95197 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.98■□□□□ 0.79
RTN3O95197 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.98■□□□□ 0.79
RTN3O95197 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
RTN3O95197 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RTN3O95197 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms