Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZNF253O75346 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF253O75346 GPX1P1-201ENST00000388829 606 ntBASIC14.79□□□□□ -0.04
ZNF253O75346 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 LSM12P1-201ENST00000411836 588 ntBASIC14.79□□□□□ -0.04
ZNF253O75346 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 CROCCP3-202ENST00000420820 1947 ntBASIC14.79□□□□□ -0.04
ZNF253O75346 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.79□□□□□ -0.04
ZNF253O75346 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.79□□□□□ -0.04
ZNF253O75346 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZNF253O75346 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZNF253O75346 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.79□□□□□ -0.04
ZNF253O75346 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.79□□□□□ -0.04
ZNF253O75346 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZNF253O75346 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 AC133552.2-202ENST00000575694 574 ntBASIC14.78□□□□□ -0.04
ZNF253O75346 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZNF253O75346 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZNF253O75346 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
ZNF253O75346 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
ZNF253O75346 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC14.77□□□□□ -0.04
ZNF253O75346 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZNF253O75346 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZNF253O75346 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
ZNF253O75346 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF253O75346 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC14.77□□□□□ -0.05
ZNF253O75346 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
ZNF253O75346 AL390719.1-204ENST00000412397 1219 ntBASIC14.77□□□□□ -0.05
ZNF253O75346 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC14.77□□□□□ -0.05
ZNF253O75346 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.77□□□□□ -0.05
ZNF253O75346 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZNF253O75346 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ZNF253O75346 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF253O75346 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ZNF253O75346 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC14.76□□□□□ -0.05
ZNF253O75346 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC14.76□□□□□ -0.05
ZNF253O75346 NOC2LP2-201ENST00000407594 1944 ntBASIC14.76□□□□□ -0.05
ZNF253O75346 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ZNF253O75346 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms