Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYRM1O43325 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LYRM1O43325 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LYRM1O43325 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LYRM1O43325 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.35■□□□□ 0.21
LYRM1O43325 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
LYRM1O43325 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.35■□□□□ 0.21
LYRM1O43325 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
LYRM1O43325 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.34■□□□□ 0.21
LYRM1O43325 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
LYRM1O43325 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC16.34■□□□□ 0.21
LYRM1O43325 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC16.34■□□□□ 0.21
LYRM1O43325 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.34■□□□□ 0.21
LYRM1O43325 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC16.34■□□□□ 0.21
LYRM1O43325 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LYRM1O43325 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LYRM1O43325 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LYRM1O43325 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LYRM1O43325 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LYRM1O43325 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYRM1O43325 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
LYRM1O43325 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LYRM1O43325 AL139384.1-201ENST00000612143 3047 ntBASIC16.33■□□□□ 0.21
LYRM1O43325 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.33■□□□□ 0.21
LYRM1O43325 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
LYRM1O43325 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.33■□□□□ 0.2
LYRM1O43325 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 SLC25A6P5-201ENST00000435663 894 ntBASIC16.33■□□□□ 0.2
LYRM1O43325 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.33■□□□□ 0.2
LYRM1O43325 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC16.33■□□□□ 0.2
LYRM1O43325 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LYRM1O43325 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.33■□□□□ 0.2
LYRM1O43325 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.33■□□□□ 0.2
LYRM1O43325 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LYRM1O43325 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LYRM1O43325 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.32■□□□□ 0.2
LYRM1O43325 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
LYRM1O43325 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LYRM1O43325 MIR572-201ENST00000384983 95 ntBASIC16.32■□□□□ 0.2
LYRM1O43325 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.32■□□□□ 0.2
LYRM1O43325 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LYRM1O43325 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.32■□□□□ 0.2
LYRM1O43325 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.32■□□□□ 0.2
LYRM1O43325 DUX4L2-201ENST00000561772 1275 ntBASIC16.32■□□□□ 0.2
LYRM1O43325 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.32■□□□□ 0.2
LYRM1O43325 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms