Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK2O00526 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC15.26■□□□□ 0.03
UPK2O00526 AC090164.3-201ENST00000610780 2143 ntBASIC15.26■□□□□ 0.03
UPK2O00526 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
UPK2O00526 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK2O00526 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.26■□□□□ 0.03
UPK2O00526 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
UPK2O00526 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 AC009113.1-201ENST00000570267 2443 ntBASIC15.25■□□□□ 0.03
UPK2O00526 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 HLA-L-209ENST00000420110 1011 ntBASIC15.25■□□□□ 0.03
UPK2O00526 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.25■□□□□ 0.03
UPK2O00526 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.25■□□□□ 0.03
UPK2O00526 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC15.25■□□□□ 0.03
UPK2O00526 RNA5SP413-201ENST00000516373 109 ntBASIC15.25■□□□□ 0.03
UPK2O00526 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 AC069544.1-201ENST00000609399 999 ntBASIC15.25■□□□□ 0.03
UPK2O00526 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
UPK2O00526 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
UPK2O00526 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
UPK2O00526 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
UPK2O00526 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC15.24■□□□□ 0.03
UPK2O00526 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.24■□□□□ 0.03
UPK2O00526 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 AC104581.1-202ENST00000635932 2618 ntBASIC15.24■□□□□ 0.03
UPK2O00526 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.24■□□□□ 0.03
UPK2O00526 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.24■□□□□ 0.03
UPK2O00526 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
UPK2O00526 AC026366.1-201ENST00000488803 879 ntBASIC15.24■□□□□ 0.03
UPK2O00526 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK2O00526 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.24■□□□□ 0.03
UPK2O00526 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.24■□□□□ 0.03
UPK2O00526 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.24■□□□□ 0.03
UPK2O00526 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
UPK2O00526 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
UPK2O00526 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
UPK2O00526 ANO7L1-203ENST00000602586 1720 ntBASIC15.23■□□□□ 0.03
UPK2O00526 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
UPK2O00526 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms