Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.14■□□□□ 0.49
RTCAO00442 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.14■□□□□ 0.49
RTCAO00442 AC026271.3-201ENST00000571884 352 ntBASIC18.14■□□□□ 0.49
RTCAO00442 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RTCAO00442 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RTCAO00442 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RTCAO00442 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.14■□□□□ 0.49
RTCAO00442 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RTCAO00442 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RTCAO00442 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.13■□□□□ 0.49
RTCAO00442 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.13■□□□□ 0.49
RTCAO00442 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
RTCAO00442 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RTCAO00442 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.13■□□□□ 0.49
RTCAO00442 TSPY7P-201ENST00000431358 1114 ntBASIC18.13■□□□□ 0.49
RTCAO00442 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.13■□□□□ 0.49
RTCAO00442 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RTCAO00442 AC130371.2-201ENST00000619443 611 ntBASIC18.13■□□□□ 0.49
RTCAO00442 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.13■□□□□ 0.49
RTCAO00442 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
RTCAO00442 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RTCAO00442 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
RTCAO00442 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTCAO00442 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTCAO00442 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RTCAO00442 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.12■□□□□ 0.49
RTCAO00442 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
RTCAO00442 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 NUDT16P1-203ENST00000513809 620 ntBASIC18.12■□□□□ 0.49
RTCAO00442 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.12■□□□□ 0.49
RTCAO00442 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.12■□□□□ 0.49
RTCAO00442 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.12■□□□□ 0.49
RTCAO00442 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
RTCAO00442 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.12■□□□□ 0.49
RTCAO00442 AP001412.1-201ENST00000608405 714 ntBASIC18.12■□□□□ 0.49
RTCAO00442 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 AC093503.3-201ENST00000624917 2352 ntBASIC18.12■□□□□ 0.49
RTCAO00442 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
RTCAO00442 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RTCAO00442 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.11■□□□□ 0.49
RTCAO00442 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.11■□□□□ 0.49
RTCAO00442 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
RTCAO00442 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.11■□□□□ 0.49
RTCAO00442 FAM207BP-201ENST00000447172 505 ntBASIC18.11■□□□□ 0.49
RTCAO00442 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.11■□□□□ 0.49
RTCAO00442 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.11■□□□□ 0.49
RTCAO00442 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.11■□□□□ 0.49
RTCAO00442 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.11■□□□□ 0.49
RTCAO00442 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
RTCAO00442 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RTCAO00442 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RTCAO00442 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms