Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 POU5F1P3-201ENST00000428824 1078 ntBASIC15.31■□□□□ 0.04
SRRM4A7MD48 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
SRRM4A7MD48 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SRRM4A7MD48 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 AL445675.2-201ENST00000620291 557 ntBASIC15.3■□□□□ 0.04
SRRM4A7MD48 Z98044.1-201ENST00000632503 1764 ntBASIC15.3■□□□□ 0.04
SRRM4A7MD48 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.3■□□□□ 0.04
SRRM4A7MD48 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SRRM4A7MD48 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 C1QBPP2-201ENST00000528754 825 ntBASIC15.29■□□□□ 0.04
SRRM4A7MD48 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.29■□□□□ 0.04
SRRM4A7MD48 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SRRM4A7MD48 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SRRM4A7MD48 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SRRM4A7MD48 WIZP1-201ENST00000531444 2299 ntBASIC15.28■□□□□ 0.04
SRRM4A7MD48 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms