Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC29.26■■■□□ 2.27
PLEKHD1A6NEE1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 Z83836.1-201ENST00000624605 1642 ntBASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 BMF-207ENST00000559701 630 ntTSL 3 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
PLEKHD1A6NEE1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 AC099778.1-201ENST00000568593 1911 ntBASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC29.24■■■□□ 2.27
PLEKHD1A6NEE1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 KRT8P7-201ENST00000533003 1432 ntBASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 AC090616.6-201ENST00000582640 721 ntBASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC29.23■■■□□ 2.27
PLEKHD1A6NEE1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 AC104390.1-201ENST00000555663 520 ntBASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 AC005332.3-201ENST00000589904 676 ntBASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
PLEKHD1A6NEE1 AL109659.2-201ENST00000606809 1674 ntBASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 AC104819.1-201ENST00000504587 486 ntBASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 AC010240.3-201ENST00000607688 395 ntBASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
PLEKHD1A6NEE1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC29.2■■■□□ 2.27
PLEKHD1A6NEE1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC29.2■■■□□ 2.27
PLEKHD1A6NEE1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
PLEKHD1A6NEE1 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 KRT18P23-201ENST00000435622 1283 ntBASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 HOXB1-202ENST00000577092 1414 ntBASIC29.2■■■□□ 2.26
PLEKHD1A6NEE1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC29.19■■■□□ 2.26
PLEKHD1A6NEE1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
PLEKHD1A6NEE1 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
PLEKHD1A6NEE1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms