Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 AC135776.1-201ENST00000319817 2481 ntBASIC16.57■□□□□ 0.24
SHISA3A0PJX4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 AC093787.1-201ENST00000450396 207 ntBASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHISA3A0PJX4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHISA3A0PJX4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHISA3A0PJX4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHISA3A0PJX4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms