Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 AL441883.1-201ENST00000566170 1045 ntBASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 AC008622.2-201ENST00000617006 1229 ntBASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.06■□□□□ 0.32
TRGV5A0A0B4J1U4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 CR769767.2-201ENST00000622735 460 ntBASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.05■□□□□ 0.32
TRGV5A0A0B4J1U4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 KRT8P3-201ENST00000519669 1449 ntBASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.04■□□□□ 0.32
TRGV5A0A0B4J1U4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 AL359075.1-203ENST00000462729 1002 ntBASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.03■□□□□ 0.32
TRGV5A0A0B4J1U4 MYC-208ENST00000641036 567 ntBASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms