Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC009113.1-201ENST00000570267 2443 ntBASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT18P6-201ENST00000555540 1265 ntBASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC098934.4-201ENST00000564127 592 ntBASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC005829.2-201ENST00000571422 1056 ntBASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 INO80E-214ENST00000620599 515 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SERP1-205ENST00000487153 657 ntTSL 4 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RNA5SP413-201ENST00000516373 109 ntBASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PNMA6B-201ENST00000538162 1200 ntBASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.46□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
TRAV8-3A0A0A6YYJ7 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms