Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 AC046158.3-201ENST00000624947 2558 ntBASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
TRAV9-2A0A087WT02 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
TRAV9-2A0A087WT02 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 GATB-213ENST00000515812 1893 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CD276-203ENST00000537340 2439 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 SLC29A4P1-201ENST00000398760 971 ntBASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC14.14□□□□□ -0.15
TRAV9-2A0A087WT02 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 ID1-201ENST00000376105 1233 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 GPX1P1-201ENST00000388829 606 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 PPP1R14BP3-201ENST00000509033 445 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 AL121832.2-201ENST00000610979 668 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 OR10C1-204ENST00000622521 1039 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 RBM17P2-201ENST00000616397 1405 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TRAV9-2A0A087WT02 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms