Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAV9-1A0A075B6T8 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 CD44-222ENST00000526025 1052 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAV9-1A0A075B6T8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 AL118508.1-201ENST00000613502 2345 ntBASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 AL121761.2-201ENST00000598007 1648 ntBASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAV9-1A0A075B6T8 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TRAV9-1A0A075B6T8 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms