Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 CRYGFP-201ENST00000418459 633 ntBASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 LIN28AP1-201ENST00000429574 405 ntBASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 AC104076.2-201ENST00000448912 469 ntBASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 DUX4L26-201ENST00000489078 1255 ntBASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGA6Q9Y5G7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 AC010203.1-204ENST00000548782 407 ntBASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 HLA-A-209ENST00000638375 975 ntBASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 RCC2P6-201ENST00000526625 1557 ntBASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGA6Q9Y5G7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 AC004951.3-201ENST00000418645 1148 ntBASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 ATP5G1P1-201ENST00000448724 379 ntBASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGA6Q9Y5G7 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 AC096733.2-201ENST00000609937 1394 ntBASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PCDHGA6Q9Y5G7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms