Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.77■■□□□ 1.08
PCDHA4Q9UN74 BX323043.1-201ENST00000641006 1765 ntBASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 AC018445.3-201ENST00000624177 1945 ntBASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
PCDHA4Q9UN74 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 AP000974.1-201ENST00000623909 2387 ntBASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.75■■□□□ 1.07
PCDHA4Q9UN74 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
PCDHA4Q9UN74 KRT8P3-201ENST00000519669 1449 ntBASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 BX088651.1-201ENST00000540551 451 ntBASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
PCDHA4Q9UN74 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms