Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 AC011506.1-201ENST00000474329 610 ntBASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 REXO1L10P-201ENST00000615707 1290 ntBASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 REXO1L12P-201ENST00000622156 912 ntBASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
PPARGC1AQ9UBK2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 AC093484.2-201ENST00000580996 2166 ntBASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PPARGC1AQ9UBK2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 AC091390.4-202ENST00000476426 537 ntBASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 DGCR10-201ENST00000609839 495 ntBASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 AC011298.2-201ENST00000617989 482 ntBASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PPARGC1AQ9UBK2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 AC008040.2-201ENST00000461049 708 ntBASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PPARGC1AQ9UBK2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms