Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 AC091874.3-201ENST00000512672 1195 ntBASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.11■□□□□ 0.49
CCM2LQ9NUG4 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 AC008550.1-201ENST00000511500 884 ntBASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCM2LQ9NUG4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ABALON-201ENST00000629058 1903 ntBASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CCM2LQ9NUG4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 AC116351.2-201ENST00000606540 1585 ntBASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.08■□□□□ 0.49
CCM2LQ9NUG4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCM2LQ9NUG4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms