Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19■□□□□ 0.63
TREX1Q9NSU2 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 GCSHP5-201ENST00000443090 522 ntBASIC18.99■□□□□ 0.63
TREX1Q9NSU2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 AC130371.2-201ENST00000619443 611 ntBASIC18.99■□□□□ 0.63
TREX1Q9NSU2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TREX1Q9NSU2 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.98■□□□□ 0.63
TREX1Q9NSU2 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC011506.1-201ENST00000474329 610 ntBASIC18.98■□□□□ 0.63
TREX1Q9NSU2 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC142381.4-202ENST00000563973 229 ntBASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC011298.2-201ENST00000617989 482 ntBASIC18.98■□□□□ 0.63
TREX1Q9NSU2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TREX1Q9NSU2 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 MESTP1-201ENST00000404287 994 ntBASIC18.97■□□□□ 0.63
TREX1Q9NSU2 B3GAT3P1-201ENST00000471720 806 ntBASIC18.97■□□□□ 0.63
TREX1Q9NSU2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TREX1Q9NSU2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TREX1Q9NSU2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms