Protein–RNA interactions for Protein: Q9NQC8

IFT46, Intraflagellar transport protein 46 homolog, humanhuman

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT46Q9NQC8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 AC007322.4-201ENST00000509611 723 ntBASIC16.42■□□□□ 0.22
IFT46Q9NQC8 AC023632.3-201ENST00000521633 145 ntBASIC16.42■□□□□ 0.22
IFT46Q9NQC8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.42■□□□□ 0.22
IFT46Q9NQC8 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 Z98044.1-201ENST00000632503 1764 ntBASIC16.41■□□□□ 0.22
IFT46Q9NQC8 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 AL356309.3-201ENST00000624132 1934 ntBASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 AC018553.1-201ENST00000616682 1458 ntBASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
IFT46Q9NQC8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 RARRES2P4-201ENST00000514074 484 ntBASIC16.4■□□□□ 0.22
IFT46Q9NQC8 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 AL031598.1-201ENST00000561511 1773 ntBASIC16.4■□□□□ 0.22
IFT46Q9NQC8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
IFT46Q9NQC8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.39■□□□□ 0.22
IFT46Q9NQC8 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
IFT46Q9NQC8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
IFT46Q9NQC8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.39■□□□□ 0.21
IFT46Q9NQC8 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
IFT46Q9NQC8 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms