Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
LRRC40Q9H9A6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.33■□□□□ 0.69
LRRC40Q9H9A6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC40Q9H9A6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRRC40Q9H9A6 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
LRRC40Q9H9A6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 KSR1P1-201ENST00000446298 240 ntBASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 ITM2C-210ENST00000620962 501 ntBASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRRC40Q9H9A6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AC004980.1-204ENST00000429707 299 ntBASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRRC40Q9H9A6 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 KRT18P29-201ENST00000397031 1267 ntBASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 TSPY20P-201ENST00000450910 630 ntBASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 RARRES2P10-201ENST00000564312 460 ntBASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRRC40Q9H9A6 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 RPS2P4-201ENST00000476944 856 ntBASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 AL359736.2-201ENST00000621992 437 ntBASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 FAM197Y4-202ENST00000622692 608 ntBASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRRC40Q9H9A6 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms